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Gene Ontology Consortium | Gene Ontology Consortium

Gene Ontology Consortium. Search GO data. Enrichment analysis (beta). Statistics. What is the Gene Ontology?. Recent news. Search form. Highlighted GO term. On the web. CytoScape EM. S. aureus Term Enrichment. AmiGO 2. biological process molecular function cellular component biological process (experimental only) molecular function (experimental only) cellular component (experimental only) H. sapiens M. musculus R. norvegicus G. gallus D. rerio D. melanogaster C. elegans D. discoideum S. pomb...

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Reviewed on Jun 13st, 2015
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    embor.embopress.org Efficient RNA virus control in Drosophila requires the RNA methyltransferase Dnmt2 | EMBOr

    Data were filtered for significance (Student's t‐test) and analysed using DAVID 6.7 ( http://david.abcc.ncifcrf.gov/ ) and tools provided by the GO consortium ( http://www.geneontology.org/ ). Protein extraction and western blotting. Twenty adult flies were homogenized in 1 volume of RIPA buffer ... Read article

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    ploscompbiol.org PLOS Computational Biology: On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report

    Only annotations with the following evidence codes were considered: EXP, IPI, IDA, IMP, IGI, IEP ( http://www.geneontology.org/GO.evidence. shtml ). For the MAP4K2 and nuclear receptor examples ( Tables 1 and 2 ), GO annotations (same evidence codes as above) were retrieved using AMIGO ( http://w... Read article

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    java-forums.org I need ideas on how to read this file

    Hi, I want to read a flat file with the following info: http://www.geneontology.org/ontology...ology_edit.obo There are about 30,000 Terms. Most terms Replies: 7 Replies: 2 Replies: 0 Last Post: 02-11-2009, 10:53 AM Replies: 5 Last Post: 02-05-2009, 11:28 AM Replies: 0 You may not post replies Yo... Read article

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    plindenbaum.blogspot.com YOKOFAKUN: A XML schema (xsd) for GeneOntology

    A XML schema (xsd) for GeneOntology Code Generation with XJC Read article

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    respiratory.publishingtechnology.com Breathing Space: hormone metabolic process

    Hormone metabolic process. Some information for this GeneOntology term has been obtained from the Gene Ontology Consortium (version 1.902).. Graphical View. Explore by:. Does it work for you?. Give us your feedback on this site to help us improve the user experience and value.. Read article

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    library.tmc.edu TMC Library | genomics

    An initiative of the NIH Blueprint for Neuroscience Research, NIF enhances discovery and access to often unindexed but publicly available research data, datasets, software and tools in the deep web, as well as linking to PubMed records and open-access literature. The NIF Project provides the NIF ... Read article

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    bg.upf.edu IntOGen » Computational Oncogenomics

    The other day I downloaded the cancer-affected Gene Ontology (GO) terms from IntOGen for up- and down-regulation via it’s Biomart interface for a few tissues. Since was only interested in the GO Cell Compartment terms, so I directly added a filter file containing all the GO CC Terms as a filter f... Read article

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    jamps.sourceforge.net Just_Annotate_My_proteins (JAMp)

    Performance improvements: we haven’t done any work on improving performance and there are some clear low hanging fruits Better and more powerful graphs: our graph user-interface can use improvements including more user-interactions. More data mining: currently only ontology functional annotations... Read article

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    bioprofiling.de Bioprofiling.de

    The second group ( KEGG spider , R spider , PPI spider ) uses novel recently introduced statistical methodology for the network based interpretation of a gene list. Regarding data used for analyses, BioProfiling.de tools cover almost all available information regarding gene function ( Gene Ontolo... Read article

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    archive.plantontology.org Plant Ontology Consortium web site at http://www.plantontology.org

    You can ask questions such as: What differential set of genes regulates the development of a leaf or leaf-like structure found in angiosperms, bryophytes and gymnosperms? What phenotypes and expressed genes are common to flower development in both dicots and monocots? To answer these questions (a... Read article

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    vectorbase.org GO (Gene Ontology) | VectorBase

    GO (Gene Ontology) Read article

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    plantontology.org PO-Amigo Browser

    Search the ontology for terms or associated annotations (e.g., gene products). Querying for ontology terms Plant Ontology Browser Users Guide Plant Ontology (PO) browser Graphical Ontology Views Ontology Tree Structure Browsing the ontology. Ontology term details Using the links out to contributi... Read article

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    pmn.plantcyc.org How to Use a Pathway Tools Website

    6.4 Highlighting Genes and Regulatory Relationship Arrows A collection of model organism databases of metabolic pathways, including reactions, enzymes, genes and substrate compounds 6.6 Omics Viewer for Regulatory Overview 4.5.2 Export to the Cellular Overview 4.6 User Pages and Directory 4.5.1 E... Read article

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    nar.oxfordjournals.org The Gene Ontology: enhancements for 2011

    The Gene Ontology: enhancements for 2011 Senior Executive Editors Impact factor: 8.026 Corporate Services For Authors Read article

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    aspgd.org Aspergillus oryzae RIB40 Genome Snapshot/Overview

    Summary of Gene Ontology (GO) annotations (as of Oct 26, 2012) Distribution of Gene Products among Cellular Component Categories Distribution of Gene Products among Molecular Function Categories Distribution of Gene Products among Biological Process Categories Genome Inventory (as of Oct 26, 2012... Read article

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